Nature Structural & Molecular Biology - Current issue : November 2008 - Vol 15 No 11
Latest highlights
Advance online publication
Transcriptional starts and bursts
Article by Singer and colleaguesUsing in situ hybridization to probe nascent RNAs and mRNA abundance from endogenous loci in single yeast cells, the levels and variability of gene expression are now directly measured. These data are used to assess consistency with models of well-spaced out single transcriptional initiation events or bursting transcription, and directly supports such expression modes in vivo.
Advance online publication
Inhibiting senescence
Article by Igarashi and colleaguesOxidative stress can lead to cellular senescence, in a p53-dependent pathway. Bach1, a transcription factor that regulates the response to oxidative stress, is now shown to inhibit senescence induced by high oxygen concentrations or by Ras. Bach1 is recruited to a subset of p53 target genes and promotes histone deacetylation thereby impeding p53 action.
Advance online publication
Motions in beta
Article by Yoshida, Nishizaka and colleaguesF1-ATPase contains three catalytic beta subunits that hydrolyze ATP, causing the central gamma subunit to rotate. Now, using a fluorescent tag and beads, domain motions in beta and rotation of gamma are observed simultaneously within the same complex, allowing the former to be correlated with catalytic events and ultimately gamma rotation.
Advance online publication
TRiCy substrates
Article by Frydman and colleaguesThe interactome of eukaryotic chaperonin TRiC/CCT is identified through a genome-wide approach, revealing enrichment in large, multidomain proteins, or components of multimeric complexes, rich in hydrophobic sequences and with high β-sheet propensity. Thus, TRiC substrates are slow-folding proteins with complex topology, which are likely to be more prone to aggregation.
Article of the month
The ATPase activity of AAA+ can be stimulated or inhibited by ligand binding although the mechanism by which this occurs is unclear. An analysis of previous structural data on various AAA+ proteins now reveals that a conserved Glu residue adopts two conformations and may thus regulate ATPase activity.
A NEW GATEWAY
A window onto the world of protein structure has opened with the new, freely accessible PSI-Nature Structural Genomics Knowledgebase. The site is designed to turn the products of the Protein Structure Initiative into knowledge that is important for understanding living systems and disease, complemented with structural biology updates from Nature Publishing Group.
THE RNAi GATEWAY
From humble beginnings as a mysterious phenomenon in plants, RNA interference (RNAi) has evolved into an area of significant impact in numerous fields. The newly launched RNAi Gateway provides a convenient portal into publications relevant to every aspect of RNAi from journals throughout the Nature Publishing Group.
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